Home / IBDP Biology 2025 SL&HL: C1.3 Photosynthesis Study Notes

IBDP Biology 2025 SL&HL: C1.3 Photosynthesis Study Notes

C1.3 Photosynthesis

From light to chemical energy

It takes energy to make CO2 combine with H2O
This energy comes from sunlight
The energy is absorbed and used by chlorophyll
Light energy is transferred into chemical energy in carbon compounds

From inorganic to organic carbon compounds

 

Reminder

Animals get their food by eating plants, or other animals
– Carnivores eat animals
– Herbivores eat plants

Plants make their own food
They combine carbon dioxide from the air with water and mineral ions from the soil
Plants do NOT get their food from the soil

The first stage by which plants make carbohydrates is called
PHOTOSYNTHESIS

Photosynthesis = Photo + synthesis = Light + Putting together

Photosynthesis = To make something (Sugar = glucose) using light

Equation of photosynthesis

Plants take in carbon dioxide from the air
They take up water (H2O) from the soil
The plants combine the \(CO_2\) with the \(H_2O\) to make the sugar, glucose \((C_6H_{12}O_6)\)

Word Equation of photosynthesis

Carbon dioxide + water → glucose + oxygen

Algae Cyanobacteria

Plants
+ algae
+ cyanobacteria
Can perform photosynthesis

Oxygen is released as a by-product (not the main point, although essential for life)

Atoms of oxygen come from the splitting of water

Energy = light energy
Gathered by pigment = chlorophyll

Photosynthetic pigments and light absorption

Leaf structure 

Location of chlorophyll

Absorption and action spectra

Absorption spectrum = how light energy is absorbed by chlorophyll
Action spectrum = how light quality affects the rate of photosynthesis

  • Absorption spectrum

 

  • Action spectrum

Word Equation of photosynthesis

Carbon dioxide +Water → Glucose + Oxygen

How can we measure the rate of photosynthesis? 

Measure how fast 

– Carbon dioxide is consumed

– Oxygen is produced

unit = volume change / unit of time
mL / hour

Compare and contrast both spectra

Absorption spectrum of chlorophyll and action spectrum of photosynthesis overlap
– Chlorophyll is the main photosynthetic pigment

Instead of sunlight, artificial light sources can be used
As long as they contain blue and red light

Chlorophyll mostly + accessory pigments
Carotenoids and xanthophylls
All catch energy from photons
– Cooperation to absorb the most energy from sunlight

Multiple photosynthetic pigments

 

 

To cover the visible spectrum as much as possible
– To absorb as much
energy as possible

 

 

 

 

Limiting factors of photosynthesis

Simple pizza making
Three ingredients needed

how many pizzas can you make with…

6 dough + 6 tomato sauce + 6 grated cheese = ???

= 6 pizzas

What are the three main limiting factors of photosynthesis?
… and why?
How to test them through experiments?

Temperature

Carbon dioxide concentration

Temperature and Carbon dioxide concentration

Respiration vs. photosynthesis

Light intensity

Temperature, Carbon dioxide concentration and Light intensity

Temperature, Carbon dioxide concentration and Light intensity 

Glasshouse production

Carbon dioxide concentration enrichment in enclosed greenhouses 

Carbon dioxide concentration enrichment outdoors

FACE = FREE AIR CARBON DIOXIDE (CO2) ENRICHMENT

Carbon dioxide concentration enrichment
Research focus and outcomes

Photosystems (HL only)

The organelle chloroplast contains “organelles’ of its own
Thylakoids
Membrane and hollow lumen
Stacked into granum (pl. grana)
Double membrane = envelope
“cytoplasm” of chloroplast = chloroplasm = stroma

All reactions of photosynthesis happen in the chloroplast

Chloroplasts in plants

Chloroplasts in plants and photosynthetic pigments

Photosystems in thylakoid membrane in plants and cyanobacteria

In thylakoid membrane
Complex of several hundreds of pigments
Energy is funneled to a final chlorophyll molecule = Reaction center

Two types of photosystems
1. Photosystem I (PSI)
Reaction center absorbs wavelength 700 nm “P700”
2. Photosystem II (PSII)
Reaction center absorbs wavelength 680 nm “P680”

1. Energy funneled to reaction center
2. In reaction center, “Ground-state” electrons are “excited”
3. High energy electrons are released from reaction center
4. Used in the following reactions…
5. “Ground-state” electrons replaced by electrons from water molecules

A single chlorophyll molecule = not enough
– Photosystem = hundreds of them

Light-dependent reactions (HL only)

Photosynthetic Reactions
1. Light-dependent reactions
2. Light-independent reactions (Calvin Cycle)

Photolysis of water and production of oxygen

Light energy used to split water: photolysis
\(H_2O\) split into \(2H^{+} + \frac{1}{2}O_2\) and \(2e^{-}\)

Splitting of water happens inside lumen of thylakoids
Protons and electrons used in later stages
Oxygen released (waste product of photosynthesis)

Importance of oxygen released by photolysis of water

Oxygen fuels cell respiration


Oxygen makes life of
many organisms possible

Electron transport chain, Chemiosmosis and ATP synthesis

1. Photolysis of water
2. Electron transport chain
3. Chemiosmosis
4. Formation of ATP
Photophosphorylation
5. Reduction of NADP+ into NADPH
NADPH and ATP given to
Light-independent reactions

1. Photolysis of water

Electrons of chlorophyll in PSII dislodged by light energy
Replaced by water’s electrons after photolysis
Photolysis: \(H_2O→ 2 e^{-} + 2 H^{+} + \frac{1}{2} O_2\)

2. Electron transport chain

Electrons transported by proteins within thylakoid membrane
Loss of energy by electrons
Light energy “re-boost” in PSI
Electrons transported by proteins within thylakoid membrane
End their transport in the stroma of the chloroplast

3. Chemiosmosis

During electron transport chain,
Protons pumped from stroma into thylakoid lumen
+ protons from photolysis of water

 – Accumulation of protons in thylakoid lumen
– Gradient of protons lumen > stroma

Protons diffuse from lumen to stroma
By facilitated diffusion using proton channels: “Chemiosmosis”

4. Formation of ATP
Photophosphorylation

Protons diffuse from lumen to stroma
– Energy released
Energy used to phosphorylate ADP into ATP by enzyme ATP Synthase

Phosphorylation depends on light

5. Reduction of NADP+ into NADPH

Protons diffused from lumen to stroma + Electrons from PSI transported into stroma
Used to reduce NADP+ into NADPH by enzyme NADP+ reductase

Non-cyclic and cyclic photophosphorylation

Non cyclic (Electrons are not recycled)

Cyclic (Electrons are recycled)

Photophosphorylation (Phosphorylation that depends on light)

Electrons are recycled

Compare and contrast non-cyclic and cyclic photophosphorylation

Non- cyclic PhotosynthesisCyclic Photosynthesis
PS I and PS II involvedPS I only involved
Reaction centre is P680Reaction centre is P700
Electron released are not cycled backElectron released are cycled back
Photolysis of water takes placePhotolysis of water does not takes place
ATP and NADPH + \(H^{+}\) are synthesizedOnly ATP  synthesized
Phosphorylation takes place at only one placePhosphorylation takes place at only two place
It is sensitive to DCMI and inhibits electron flowIt is not sensitive to di chloro di methyl urea  (DCMI) 

Light-independent reactions (HL only)

\(CO_2\) from air fixed into carbohydrates
Also need ATP and NADPH from LDR

Do not need light
Can happen in dark, and under light
Light-independent reactions
Happen in stroma of chloroplast
Produce sugar

Also produce ADP + Pi and \(NADP^{+}\)
Given to Light-dependent reactions

1. Carboxylation of RuBP
2. Reduction to G3P
3. Regeneration of RuBP
Production of sugar
NADPH and ATP given by
Light-independent reactions

1. Carboxylation of RuBP

\(CO_2\) from air fixed: inorganic to organic
Combined with Ribulose-bisphosphate (RuBP) to give a 6-carbon compound
Unstable: split into 2X 3-carbon compound

“Carboxylation” = adding carbon and oxygen
RuBP is carboxylated

Enzyme = Rubisco
RuBP carboxylase-oxygenase
Most abundant enzyme on Earth
In plants and cyanobacteria

Not effective in low \(CO_2\) concentrations.

2. Reduction to G3P

2X  3-carbon compound reduced to glycerate-3-phosphate (G3P)
Using NADPH and ATP from LDR

3. Regeneration of RuBP

To allow the Calvin cycle to continue
Need to regenerate RuBP
Available for next \(CO_2\) fixation
Using ATP rom LDR

Production of sugar

2X 3-carbon compound reduced to glycerate-3-phosphate (G3P)
Using NADPH from LDR
“Sugar” = triose phosphate (TP)

Do the numbers add up to produce glucose?

Need 6C to make one glucose
– Need 2 times 3 cycles to produce one glucose

Interdependence of the light-dependent and Light-independent reactions

The “only function” of light-dependent reactions
Is to (re)generate ATP and \(NADPH_2\) to fuel the Calvin cycle

What happens if there is no light?

Light-dependent reactions stop
– No production of ATP and NADPH
– Light-independent reactions stop

What happens if there is no \(CO_2\)?

  • Light-independent reactions stop

– No production of ADP and \(NADP^{+}\)
– Light-dependent reactions stop

  • Photosystem II stops functioning

– Light-dependent reactions stop
– No production of ATP and NADPH
– Light-independent reactions stop

Glucose, then what? (HL only)

 

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